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Transcriptional signatures containing Affymetrix probes for ESR1, GATA3 and FOXA1.

Journal: PLoS ONE

Article Title: TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database

doi: 10.1371/journal.pone.0004001

Figure Lengend Snippet: Transcriptional signatures containing Affymetrix probes for ESR1, GATA3 and FOXA1.

Article Snippet: All sample (n = 159) have been hybridized onto the GPL96 platform (Affymetrix GeneChip Human Genome U133 Array Set, HG-U133A).

Techniques:

Transcriptionnal signatures displaying high enrichment (q value <1.10−20 ) for any of the human cytoband tested.

Journal: PLoS ONE

Article Title: TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database

doi: 10.1371/journal.pone.0004001

Figure Lengend Snippet: Transcriptionnal signatures displaying high enrichment (q value <1.10−20 ) for any of the human cytoband tested.

Article Snippet: All sample (n = 159) have been hybridized onto the GPL96 platform (Affymetrix GeneChip Human Genome U133 Array Set, HG-U133A).

Techniques:

(A) A low resolution image made of 22,215 probes from GPL96 platform as rows and 3,114 GPL96 specific TS as columns. Red color indicates the presence of a gene in the corresponding TS (default to black). (B) Zooms of the corresponding areas showing some immune system related meta-signatures. (C) Representative genes that fall into these clusters.

Journal: PLoS ONE

Article Title: TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database

doi: 10.1371/journal.pone.0004001

Figure Lengend Snippet: (A) A low resolution image made of 22,215 probes from GPL96 platform as rows and 3,114 GPL96 specific TS as columns. Red color indicates the presence of a gene in the corresponding TS (default to black). (B) Zooms of the corresponding areas showing some immune system related meta-signatures. (C) Representative genes that fall into these clusters.

Article Snippet: All sample (n = 159) have been hybridized onto the GPL96 platform (Affymetrix GeneChip Human Genome U133 Array Set, HG-U133A).

Techniques: